Whole genome shotgun sequencing of Salmonella enterica subsp. enteric... - SRA

SRX829655: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Kentucky str. CFSAN011776 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1M spots, 438.4M bases, 285.2Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: FOOD AND DRUG ADMINISTRATION, CENTER FOR FOOD SAFETY AND APPLIED NUTRITION (CFSAN)

Study: FDA-CFSAN: microbial foodborne pathogen research

PRJNA243331 • SRP042343 • All experiments • All runs

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Draft and complete genome sequences of foodborne bacterial pathogens collected for research purposes at the FDA's Center for Food Safety and Applied Nutrition.

Sample:

SAMN03275159 • SRS808437 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Kentucky

Library:

Name: Salmonella enterica str. CFSAN011776 shotgun

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Kentucky str. CFSAN011776.

Spot descriptor:

1 forward251 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 1M spots, 438.4M bases, 285.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1741436	1,019,495	438.4M	285.2Mb	2015-01-05

ID:: 1179430

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